miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|159661264|gb|EG389767.1|EG389767 GCATTTTTNNNTTTTTTTTTTCGACTGTTGTAATAGATACCAAATCACTTTATTTATCTCAGGGCATGTGTTGCAAGTGT
ACACCAAATTAGCCACTTAATGGGCATGTAATATGTACTTCCTCCGTCCCATTGTAATAACGTCATAATATTATATTATG
GAACGGAGGGAGTAATATTATATATGTACCTAAAGTAAATTATGCGACCAATTTATTGTGTAGTGCATGGTCGCCCTTCC
CGCGCGCTCGCGAAGACTCAGACGCTGTCCTTCACCTGGCTGCTGTAACTGTTCTGCACGTCGTTGTAGCGGTCCCACAC
CATGATCCCACCGTAGTTGCTGGCGCCCTTCACGCCGGGGAGCACAGCCGACGTCAGGTCGCCAGGCGGCACGTACCCGC
TCCCGGCCGCGGCCGTCGAGGCCGGCACGCCGAGGTAGAAGCCCCCGGACACCTTCACGCTGCTCGTCCACGTGTTCCAC
GCGCTCTGCAGGTTGCTCGCGTCCCCGCTCGCGTACTGGCACGGCGGGTTGTTGTAGAACTGCACCCACACGTTGTCGAA
CAGCCCCGTCTGCAGCGCCGGCCCCAGCGACGCGTCCGGGTACGGGCACTGCGGCGCCGCCGTCAGGTACACCTTCCTGC
CCTGCGCGCTGTACTGGGACAGGAACGTGGCCAGCTCGTC




Most similar to sp|P23472|CHLY_HEVBR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P23472|CHLY_HEVBR Hevamine-A OS=Hevea brasiliensis PE=1 SV=2
          Length = 311

 Score =  187 bits (475), Expect = 5e-47
 Identities = 84/140 (60%), Positives = 109/140 (77%)
 Frame = -1

Query: 680 DELATFLSQYSAQGRKVYLTAAPQCPYPDASLGPALQTGLFDNVWVQFYNNPPCQYASGD 501
           D+LA +LS YS QG+KVYLTAAPQCP+PD  LG AL TGLFD VWVQFYNNPPCQY+SG+
Sbjct: 161 DDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGN 220

Query: 500 ASNLQSAWNTWTSSVKVSGGFYLGVPASTAAAGSGYVPPGDLTSAVLPGVKGASNYGGIM 321
            +N+ ++WN WT+S+  +G  +LG+PA+  AAGSGYVPP  L S +LP +K +  YGG+M
Sbjct: 221 INNIINSWNRWTTSIN-AGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVM 279

Query: 320 VWDRYNDVQNSYSSQVKDSV 261
           +W ++ D +N YSS + DSV
Sbjct: 280 LWSKFYDDKNGYSSSILDSV 299